BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031F09LP1|AL429439
(888 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig924 1559 0.0
3x_Contig1560 123 6e-28
>3x_Contig924
Length = 2007
Score = 1559 bits (773), Expect = 0.0
Identities = 828/856 (96%), Gaps = 4/856 (0%)
Strand = Plus / Plus
Query: 13 ctttgtttcaatattttttatttatactaataaaatatgattatttattaattaattccc 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 ctttgtttcaatattttttatttatactaataaaatatgattatttattaattaattccc 956
Query: 73 tgcgcgactcacccaaccctttatgagggtcgtkatgatgtcgcgcagggtttagatatt 132
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 957 tgcgcgactcacccaaccctttatgagggtcggg-tgatgtcgcgcagggtttagatatt 1015
Query: 133 tttttaatatataattkttgttcttcatttaaaggtttattttgtttataataatttatt 192
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1016 tttttaatatataatttttgttcttcatttaaaggtttattttgtttataataatttatt 1075
Query: 193 acatgaataaatttatctaaactattagatttatcagataataaaggatattctttaaaa 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1076 acatgaataaatttatctaaactattagatttatcagataataaaggatattctttaaaa 1135
Query: 253 taatttaaaataaaaatacaattatttaatcctgaaattcataattgtcaattatcatct 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1136 taatttaaaataaaaatacaattatttaatcctgaaattcataattgtcaattatcatct 1195
Query: 313 ttagaattagaataaactttaccaatatttttttcactattaatgttatataatgaatta 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1196 ttagaattagaataaactttaccaatatttttttcactattaatgttatataatgaatta 1255
Query: 373 gtattagatttatcaataaataaatttaaratatgttctaatacatatttattaacaata 432
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1256 gtattagatttatcaataaataaatttaaaatatgttctaatacatatttattaacaata 1315
Query: 433 tgtttttgacttaatgcatataarartctaggtgtatttttattatcttttaaagaaata 492
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 1316 tgtttttgacttaatgcatataaaaatctaggtgtatttttattatcttttaaagaaata 1375
Query: 493 tcaaaacaaccttcagcatcagtaaatccagataatcaataatcatttaaagtaggtaat 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1376 tcaaaacaaccttcagcatcagtaaatccagataatcaataatcatttaaagtaggtaat 1435
Query: 553 ttacaataattttkkrrrataattataggttcattatttttkaataattktkcatttaat 612
||||||||||||| ||||||||||||||||||||||| ||||||| | ||||||||
Sbjct: 1436 ttacaataattttttaaaataattataggttcattattttttaataatttttcatttaat 1495
Query: 613 ttagctaaaaaaattataaatttaccatatctagtaggtaatactaaattaccattaaaa 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1496 ttagctaaaaaaattataaatttaccatatctagtaggtaatactaaattaccattaaaa 1555
Query: 673 attaatgataataaataaatwtctcttcttttatgtactactcatctatatgttatatct 732
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1556 attaatgataataaataaatatctcttcttttatgtactactcatctatatgttatatct 1615
Query: 733 tttttagattgtaaaattacatctcctatattaddwttwtttttnatataatttdaaatt 792
||||||||||||||||||||||||||||||||| || ||||| ||||||||| |||||
Sbjct: 1616 tttttagattgtaaaattacatctcctatattaaaattatttttaatataatttaaaatt 1675
Query: 793 tttatwtctttagragttacaacaacagaaatatcacttcttttta-taaaat-aawgaa 850
||||| ||||||| |||||||||||||||||||||||||||||||| |||||| || |||
Sbjct: 1676 tttatatctttagaagttacaacaacagaaatatcacttctttttattaaaataaatgaa 1735
Query: 851 ccttta-cttcaaaaa 865
|||||| |||||||||
Sbjct: 1736 cctttaccttcaaaaa 1751
>3x_Contig1560
Length = 9209
Score = 123 bits (61), Expect = 6e-28
Identities = 68/71 (95%)
Strand = Plus / Minus
Query: 374 tattagatttatcaataaataaatttaaratatgttctaatacatatttattaacaatat 433
||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 2167 tattatatttatcaataaataaatttaaaatatgttctaatacatatttattaataatat 2108
Query: 434 gtttttgactt 444
|||||||||||
Sbjct: 2107 gtttttgactt 2097
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,466
Number of Sequences: 1807
Number of extensions: 10466
Number of successful extensions: 324
Number of sequences better than 1.0e-20: 2
length of query: 888
length of database: 10,358,551
effective HSP length: 16
effective length of query: 872
effective length of database: 10,329,639
effective search space: 9007445208
effective search space used: 9007445208
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.3 bits)